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PDB Structure
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GaussView
7,921
gaussian.com
GaussView is the most advanced and powerful graphical interface available for Gaussian...
with
structures
from
PDB
files: * Select the desired
structure
(s) from multi-
structure
VMD
free
4,617
University of Illinois
VMD is a software application that was designed to allow biophysics and chemistry specialists...
VMD is a software application that was designed to allow biophysics and chemistry specialists
Cn3D
free
2,541
NCBI
Cn3D (to be read "see in 3D") is an application offered as support...
are derived from
PDB
(Protein...correlations between
structure
and sequence
Unipro UGENE
free
1,228
Unipro, Russia
UGENE is a free cross-platform genome analysis suite. It works perfectly on Windows, Mac OS or Linux and requires...
databases; -Protein secondary
structure
prediction using GOR...for files in
PDB
LigandScout
416
InteLigand GmbH
LigandScout is a fully integrated platform for accurate virtual screening based on 3D chemical feature pharmacophore...
ligand and
structure
based pharmacophore...Automatic interpretation of
PDB
ligands using geometry
CueMol
free
41
BKR Laboratory
CueMol is a computer program for macromolecular structure visualization. CueMol performs...
for macromolecular
structure
visualization. CueMol...molecular coordinates (
PDB
format), electron
BioSolveIT PoseView
31
BioSolveIT GmbH
PoseView automatically generates high-quality 2D structure-diagrams of protein-ligand complexes provided as 3D...
be provided as raw
PDB
(Protein Data Bank)...format describing the 3D
structure
of protein molecule
Swiss PDB Viewer
free
25
Deepview
Swiss-PdbViewer is an application that provides a user friendly interface allowing...
in order to deduce
structural
alignments and compare
SMole
free
23
Hyunseob Song
SMole a molecule builder, which can produce 3D view of chemical structures. You can easily analyze...
easily analyze the molecular
structure
by rotating, moving...Data Bank format (
PDB
)
Book2Shelf
free
17
Alex Shabarshov
Book2Shelf is a free e-book organizer and cataloging tool for FictionBook documents (FB2)...
you move through the
structure
of documents quickly
COSMOview
free
17
COSMOlogic GmbH & Co. KG
COSMOview features: - open general formats xyz, sdf, ml2, pdb (only 3D structure...
is a molecular 3D
structure
viewer and can open...sdf, ml2,
pdb
(only 3D
structure
) - open
SEQMOL-Kd
15
BiochemLabSolutions
SEQMOL can be used to align multiple protein and DNA sequences...
SEQMOL is a
PDB
structure
analysis suite. SEQMOL can...map these features onto
PDB
MolPOV
free
6
University of Florida
MolPOV is a graphics file converter that reads Brookhaven Protein Data Bank...
be from the Brookhaven
PDB
...that can store
structures
in the
PDB
format. A POV
HYDROpro
free
6
A. Ortega, D. Amorós, J. Garc1a de la Torre
HYDROPRO computes the hydrodynamic properties of rigid macromolecules (globular proteins...
structure
, as specified by the atomic coordinates taken from a
PDB
ProSA
free
3
Center of Applied Molecular Engineering
ProSa is a powerful tool in protein structure research. ProSa supports and guides...
helpful for experimental
structure
...potentials, an enhanced
PDB
parser, a command
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